CDS

Accession Number TCMCG006C85180
gbkey CDS
Protein Id XP_013687113.1
Location join(16404205..16404252,16404328..16404449,16404549..16404608,16404686..16404805,16404865..16404984,16405239..16405551,16405662..16405820,16405902..16406008,16406113..16406203,16406305..16406446,16406598..16406754,16406951..16407067,16407176..16407560)
Gene LOC106391090
GeneID 106391090
Organism Brassica napus

Protein

Length 646aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA293435
db_source XM_013831659.2
Definition uncharacterized protein LOC106391090 [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category S
Description Rhamnogalacturonate lyase
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
KEGG_ko ko:K18195        [VIEW IN KEGG]
EC 4.2.2.23        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs -

Sequence

CDS:  
ATGATGTCGGACCAAAGTTCTGTTCACTTGGATGTCAAAGACAACCATGTGGTTATGAAGAATGGTATAGTCGAAGTGACCATATCAAAACCAGATGGTTTTGTCACTGGAATCTCTTACCATGGTGTCAACAATCTACTAGAAAGTCATAATGAAGACTATGATCGAGGTTACTGGGACCTTGTTTGGAGCGAGTATGGAACGCCTGGAACCACAGGAAACTCCGAGCGGATCAAAGGCACAAGTTTTCAAGTAGTACTGGAAAATGAGGAACTGGTAGAGATATCCTTCACAAGGAAATGGGATTCTTCTCTCAAAGACCATATTGCTCCCATTAATGTCGACAAGAGGTTCATAATGCGTAAAGATGTTACTGGATTCTACTCATACGGAATATTCGAGCATCTAGCTGAATGGCCAGCTTTTAACTTGCCTCAGACAAGGATTGTTTACAAGCTTCGTAAAGACAAGTTTCGATATATGGCAGTTGCTGACAACAGGCAGAGGAAAATGCCTCTTCCAGAAGATAGATTGGGTAAAAGAGGAAGACCTTTGGCTTATCCTGAAGCTGTTCTTCTTGTTCATCCTGTTGAAGAAGAGTTCAAAGGAGAGGTTGATGACAAGTATGAGTATTCATGTGAGAACAAAGATCTTAAAGTGCATGGATGGATCTCACATAACTTGGATTTGGGTTGCTGGCAAATCATTCCTAGCAATGAGTTCAGATCAGGAGGCTTGTTGAAACAGAATCTTACTTCTCATGTTGGTCCAATCAGTCTCGCTATGTTTATAAGTGCTCATTATGCGGGTGAGGACATGGTGATGAAGGTAAAAGCAGGGGAGTCATGGAAGAAGGTGTTTGGTCCTGTTTTCACTTACCTTAATTGTTTGCCTGACCAAACCTCTGATCCTCTTTCACTATGGCAAGACGCTAAAAACCAGATGTTAATTGAAGTCCAAAGCTGGCCTTACGGTTTCCCCGCTTCAGAAGACTATGCATTGTCTGATAAGCGTGGTTGCATCAATGGTAGATTACTAGTACGAGACAAGTCCCTTAGTGATGAACTTTTACCAGCGAATGGTGCTTTCATAGGTTTGGCTCCACCAGGAGAGGTTGGATCTTGGCAAACAGAATCTAAAGGATATCAGTTCTGGACAGAAGCAGATGCAGATGGTTATTTCACCATAAATAATATCCGAGAAGGTGAATATAATCTCAATGCTTATGTGACAGGATGGATTGGAGACTATCAATACGAAGAACTGATTACCATCACTGCAGGCTGCGACATTGACATTAGCAGTATCGTGTATGAACCGCCACGAGATGGGCCAACGGTGTGGGAAATAGGAATCCCTGACCGGTCGGCAGCTGAGTTCTTTGTTCCAGACCCAAATCCCAAATACATCAATAAGCTATATATTGGTCATCCTGACAGGTTTAGGCAATACGGGCTATGGGAAAGATACACAGAACTATATCCTAAGGAAGATCTGATGTTCACCATTGGCGTCAGTGATTACCAAAAGGATTGGTTCTTTGCACACGTTACTAGGAAAACAGGAGATGACACATATGAAAAAACGACGTGGCAAATAAAATTCAAGCTCGAGAAGGTGCAGGAAAACAGCACATACAAACTTAGGATCACACTAGCAACCGCAAATGTAGCGGAATTACTGGTGAGGATGAACGAGGATGAGAGTGAAAAGAGTTTGATTTTCACAACTGGTGTAATAGGACACGACAACACGATCGCAAGACATGGGATACATGGACTCTGTAGACTTTATAATGTGGACGTACCAAGTGAGAAGCTTCTGGAAGGAGACAACACTTTGTTCTTGACACAAGCCATGACTACCGTTGGGGCTTTTAATGGCCTTATGTATGACTATATCCGCCTTGAAGAGCCTTGTTTAGCTTCGAACTTTCACTAA
Protein:  
MMSDQSSVHLDVKDNHVVMKNGIVEVTISKPDGFVTGISYHGVNNLLESHNEDYDRGYWDLVWSEYGTPGTTGNSERIKGTSFQVVLENEELVEISFTRKWDSSLKDHIAPINVDKRFIMRKDVTGFYSYGIFEHLAEWPAFNLPQTRIVYKLRKDKFRYMAVADNRQRKMPLPEDRLGKRGRPLAYPEAVLLVHPVEEEFKGEVDDKYEYSCENKDLKVHGWISHNLDLGCWQIIPSNEFRSGGLLKQNLTSHVGPISLAMFISAHYAGEDMVMKVKAGESWKKVFGPVFTYLNCLPDQTSDPLSLWQDAKNQMLIEVQSWPYGFPASEDYALSDKRGCINGRLLVRDKSLSDELLPANGAFIGLAPPGEVGSWQTESKGYQFWTEADADGYFTINNIREGEYNLNAYVTGWIGDYQYEELITITAGCDIDISSIVYEPPRDGPTVWEIGIPDRSAAEFFVPDPNPKYINKLYIGHPDRFRQYGLWERYTELYPKEDLMFTIGVSDYQKDWFFAHVTRKTGDDTYEKTTWQIKFKLEKVQENSTYKLRITLATANVAELLVRMNEDESEKSLIFTTGVIGHDNTIARHGIHGLCRLYNVDVPSEKLLEGDNTLFLTQAMTTVGAFNGLMYDYIRLEEPCLASNFH